Shopify Guides

How to Delete Your Shopify Store Permanently: A Step-by-Step Guide

September 25, 2025
How to Delete Your Shopify Store Permanently: A Step-by-Step Guide

Table of Contents

  1. Introduction
  2. Pre-Deletion Preparations
  3. Step-by-Step Guide to Deleting Your Shopify Store Permanently
  4. What Happens After Deletion?
  5. What Are Your Options Instead of Closing?
  6. Conclusion
  7. FAQ

No business owner ever dreams of shutting down their online store, but sometimes circumstances change. Perhaps your latest marketing efforts didn’t pan out as expected, or maybe you’ve decided to pursue a different direction entirely. Whatever the reason, understanding how to delete your Shopify store permanently is essential to ensure that you leave no loose ends.

In this guide, we’ll navigate the intricacies of closing your Shopify account effectively. You'll learn what steps to take before deletion, the exact process for shutting down your store, and what to expect afterward. By the end of this post, you should feel confident in managing your Shopify experience, whether you’re closing up shop for good or simply taking a break.

Introduction

As we venture into the complexities of eCommerce, consider this: nearly 20% of small businesses fail within their first year due, in part, to mismanaged online operations and unexpected financial hardships. This stark statistic underlines the unpredictability of running an online store—sometimes the best choice may be to let go.

The process for deleting a Shopify store can seem daunting at first—after all, you’re potentially canceling an investment you made in your business. But fear not; once you're aware of the ins and outs, it can be a straightforward procedure. This blog is designed to equip you with a clear understanding of how to permanently delete your Shopify store and ensure everything’s handled properly.

We will cover various topics, including pre-deletion preparations, the step-by-step process for closing your store, and what happens to your data post-deletion. You’ll also learn about the importance of notifying customers, managing financial obligations, and what you should back up before proceeding.

By the end of this article, you will know exactly what needs to be done to successfully close your Shopify store, allowing you to move forward without uncertainty.

Pre-Deletion Preparations

Before you make the definitive decision to delete your Shopify store, several crucial steps need to be addressed. Taking care of these beforehand will streamline the deletion process and ensure a smoother experience.

1. Settle Outstanding Bills

Before proceeding, make sure all outstanding bills are settled. Shopify will not allow you to delete your store if there is any unpaid balance on your account. This includes monthly subscription fees, transaction fees, and payments for apps or other services associated with your store.

2. Backup Your Store Data

While it may seem permanent, deleting your store doesn’t necessarily mean your data is irrevocably lost (for a limited period). However, to be on the safe side, it’s advisable to create a backup of your store data. Utilize the export feature to download CSV files for your product data, customer lists, and order histories, so you have a record for future reference.

3. Cancel Third-Party App Subscriptions

If you’re using any third-party apps linked to your Shopify account, canceling those subscriptions is essential. Apps often charge recurring fees, and failing to end those services can lead to unexpected charges even after your store is closed. Go through your Apps section in the Shopify admin and ensure everything is properly uninstalled or canceled.

4. Remove Custom Domains

If you purchased a custom domain through Shopify, now is the time to transfer it. If you fail to do this prior to deletion, you may lose the ability to use that domain with a different provider later on. Visit your domain settings in Shopify to initiate the transfer or cancellation.


By completing these crucial steps, you’re setting yourself up for a seamless transition into the next phase of your business—whether that’s pursuing another venture or taking a break.

Step-by-Step Guide to Deleting Your Shopify Store Permanently

Now that you’ve handled all pre-deletion tasks, let’s dive into the process of deleting your Shopify store. Here's a straightforward, step-by-step guide to help you navigate through the necessary actions.

Step 1: Sign In to Your Shopify Account

Begin by logging into your Shopify account as you normally would. Visit Shopify.com and enter your credentials.

Step 2: Navigate to Settings > Plan

Once you’re logged in, go to the 'Settings' tab located at the bottom left of your dashboard. From the Settings menu, click on the 'Plan' option. Here, you will find options related to your current subscription.

Step 3: Deactivate Your Store

In the Plan section, look for the button that says "Deactivate Store." A pop-up window will appear, giving you options to either pause your store or deactivate it entirely. Click the 'Deactivate Store' option labeled accordingly, and then proceed to the next step.

Step 4: Confirm the Deactivation

You’ll be prompted to choose a reason for closing your store from a dropdown list. If you don’t find an appropriate option, you can select "Other" and provide your specific reason. After making your selection, click 'Continue.'

Step 5: Enter Your Password to Confirm

At this point, Shopify will require you to enter your password again for verification purposes. This step helps ensure that only you can initiate the deletion process. Enter your password and click on the 'Deactivate Now' button.

Step 6: Confirmation of Deletion

Once you’ve completed all the above steps, you will receive a confirmation email stating that your Shopify store has been permanently deleted. Congratulations! You’ve successfully navigated the process of closing your Shopify store.

Important Note on Reactivating Your Store

It’s worth noting that while your store is permanently deleted, Shopify retains your store data for up to 30 days. If you change your mind during this period, you can contact their support team for assistance in reactivating your store. However, after 30 days, all data is irretrievably lost.


This step-by-step guide is designed to make the closing process as simple as possible, allowing you to take control of your decisions without excessive hassle.

What Happens After Deletion?

Once your Shopify store is permanently closed, what can you expect? Understanding the post-deletion landscape will assuage any concerns and prepare you for the next steps.

Data Retention and Security

Shopify retains your store and account data for a limited time, as mentioned earlier, for potential reactivation during that 30-day grace period. After this period, all data is deleted in compliance with their data retention policies.

Financial Implications

It’s critical to comprehend that you will not be refunded for any subscription fees if you choose to delete your store. If you were utilizing Shopify while on a free trial, rest assured you won’t incur charges, but if you're a paying member, fees will still apply until closure.

Personal Data Removal

If you reside in the EU, GDPR regulations allow individuals to request the complete removal of personal data. Should you wish to take this step, contact Shopify support following your store's closure to ensure all your information is wiped from their system.


As you transition after closing your Shopify store, knowing what to expect can help mitigate any anxiety around the decision and ensure that you move forward on the right foot.

What Are Your Options Instead of Closing?

If you’re not entirely ready to say goodbye to your Shopify store, consider some alternative options that might better suit your needs.

1. Pause Your Store

If things have become overwhelming or you’re experiencing challenges but still wish to keep your option open, you can opt to pause your store temporarily. Shopify offers a special plan called the 'Pause and Build' plan for just $9 per month. This allows you to keep your products and data intact while temporarily stopping transactions and new orders.

2. Re-evaluate Your Business Model

Before making drastic decisions, consider analyzing your business model. Are there ways to streamline operations, automate processes, or reach new markets without closing your store? Sometimes reworking existing sales strategies or introducing new inventory can reinvigorate your business.

3. Seek Professional Help

If you're feeling stuck, consulting with an ecommerce expert or business advisor can provide you with fresh insights and strategies you may not have considered. They might help you uncover opportunities for growth that could have a positive impact on your store’s performance.


Being proactive about your business choices ensures that you consider all avenues available to you before you pull the plug.

Conclusion

Deciding to delete your Shopify store can be a significant and, at times, tough choice. However, by knowing how to close your account permanently with the necessary preparations, you can move forward confidently.

From settling outstanding bills and backing up your data to following through with the actual deletion steps, taking control of this process benefits both your mental clarity and your financial obligations. Remember to keep in mind the 30-day retention of data should you change your mind post-deletion.

If you’re simply feeling overwhelmed, consider pausing your store or re-evaluating your business model before making any permanent decisions. There’s always a potential for recovery or starting anew.

We encourage you to reflect on the information provided throughout this blog and determine the best path for you moving forward in the eCommerce space.

FAQ

How do I permanently delete my Shopify store?

To delete your Shopify store permanently, you must navigate to your account settings, go to the Plan section, click 'Deactivate Store,' and follow the prompts to confirm. Make sure to handle outstanding bills and back up your data beforehand.

What happens to my data after I delete my Shopify account?

Shopify retains your store data for up to 30 days for potential reactivation. After this period, your data is permanently deleted from their system.

Will I be refunded if I close my Shopify store?

You will not receive any refunds for subscription fees if you close your store. However, you are not charged during a free trial.

Can I pause my Shopify account instead of closing it?

Yes, you have the option to pause your Shopify store. This allows you to temporarily stop transactions while keeping your data intact for future use.

What if I experience difficulties deleting my store?

If you encounter any challenges during the deletion process, reach out to Shopify's customer support for assistance. They can help guide you through specific issues you might face.


Moving on from your store doesn’t define your journey as a merchant; it provides room for new opportunities. If you find yourself considering new ventures or need a break, always keep the lessons learned throughout your eCommerce experience with you.


Participation is optional and ShipAid is not insurance. It does not provide indemnification for loss, damage, or liability. Instead, it allows brands to offer a free replacement if an item is not delivered or arrives in unsatisfactory condition. ShipAid does not sell or ship products, but provides tools for brands to manage replacements. All resolution decisions are made by the brand and may require proof of damage or non-delivery or other information

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